John McAlister

John McAlister

he/him

Math PhD Student at the Universtiy of Tennessee - Knoxville

Research

My current research focuses on the interactions between relational structure and equilibria in dynamic multiplayer games. To learn more you can read my research statement here. You can also find my articles on my Google Scholar profile.

Preprints

A nonlinear nonlocal diffusion equation for the analysis of continuous coordination and anti-coordination type games

Under Review at the Journal of Mathematical Biology, 2025

I introduce a continuous model of a modified coordination game and examine the dynamic and equilibrium properties of the resulting nonlinear nonlocal diffusion equation.

Recommended citation: McAlister J.S., Fefferman, N.H. Mengesha, T.A. (2025) Nonlinear Nonlocal Diffusion Equation for the Analysis of Continuous Coordination and Anti-coordination Type Games. submitted to Journal of Mathematical Biology. https://doi.org/10.48550/arXiv.2506.13929
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A game theoretic treatment of contagion in trade networks

Under Review at PLOS Computational Biology, 2025

In this paper we examine a game theoretic model of the wildlife trade network and investigate how network structure impacts spillover risk of disease.

Recommended citation: McAlister J. S., Brunner, J.L., Galvin, D. J., Fefferman, N.H. (2025) A Game Theoretic Treatment of Contagion in Trade Networks. Submitted to PLOS computational Biology. https://doi.org/10.48550/arXiv.2504.06905
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Journal Articles

Edge addition and the change in kemeny’s constant

Discrete Applied Mathematics, 2025

This paper finds upper and lower bounds for the change in Kemeny’s constant under edge addition from a tree

Recommended citation: Kirkland, S., Li, C., McAlister, J.S., and Zhang, X. (2023) Edge Addition and the Change in Kemeny's Constant. Discrete Applied Mathematics. https://doi.org/10.1016/j.dam.2025.04.031
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An interdisciplinary perspective of the built-environment microbiome

FEMS Microbiology Ecology, 2025

This paper discusses the challenges of studying the built environment microbiome because of the inherent interdisciplinary nature of the field.

Recommended citation: McAlister, J.S., M.J. Blum, Y. Bromberg, N.H. Fefferman, Q. He, E. Lofgren, D.L.Miller, C. Schreiner, K. Selcuk Candan, H. Szabo-Rogers, and J. M. Reed (2025) An Interdisciplinary Perspective of the Built-Environment Microbiome. FEMS Microbiology Ecology https://doi.org/10.1093/femsec/fiae166
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A new paradigm for pandemic preparedness

Current Epidemiology Reports, 2023

This paper discusses the issues with the current state of pandemic science and a vision for the future.

Recommended citation: Fefferman, N.H., McAlister, J.S., Akpa, B.S., Akwataghibe, K., Azad F.T., BarkleyK., Bleichrodt, A., Blum M.J., Bourouiba, L., Bromberg, Y., Candan K.S., Chowell,G.,Clancey, E., Cathroan, F.A., DeWitte, S.N., Fernandez, P., Finnoff, D., Flaherty, D.T.,Gibson, N.L., Harris, N., He, Q., Lofgren, E.T., Miller, D.L., Moody, J., Muccio, K.,Nunn, C.L., Papes, M., Pachalidis, I.Ch., Pasquale, D.K., Reed, M.J., Rogers, M. B.,Schreiner, C. L., Strand E.B., Swanson C.S., Szabo-Rodgers, H. L., and Ryan, S. J. (2023) A New Paradigm for Pandemic Preparedness. Current Epidemiological Reports. https://doi.org/10.1007/s40471-023-00336-w
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An adaptive dynamic model of a vigilance game among group foragers

Journal of Theoretical Biology, 2022

This paper discusses a game theoretic model of vigilance and offers theoretical support to the many eyes hypothesis of group foraging

Recommended citation: McAlister, J.S., Hamilton, I. (2022) An Adaptive Dynamic Model for the Vigilance Game in Group Foragers. Journal of Theoretical Biology. 538:111033. https://doi.org/10.1016/j.jtbi.2022.111030
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